Using the Edge Impulse Python SDK with SageMaker Studio

Amazon SageMaker Studio is an integrated development environment (IDE) that provides a single web-based visual interface where you can access purpose-built tools to perform all machine learning (ML) development steps, from preparing data to building, training, and deploying your ML models, improving data science team productivity by up to 10x. You can quickly upload data, create new notebooks, train and tune models, move back and forth between steps to adjust experiments, collaborate seamlessly within your organization, and deploy models to production without leaving SageMaker Studio.

To learn more about using the Python SDK, please see: Edge Impulse Python SDK Overview.

This guide has been built from AWS reference project Introduction to SageMaker TensorFlow - Image Classification, please have a look at this AWS documentation page.

Below are the changes made to the original training script and configuration:

The Python 3 (Data Science 3.0) kernel was used.
The dataset has been changed to classify images as car vs unknown. You can download the dataset from this Edge Impulse public project and store it in your S3 bucket.
The dataset has been imported in the Edge Impulse S3 bucket configured when creating the SageMaker Studio domain. Make sure to adapt to your path or use the AWS reference project.
The training instance used is ml.m5.large.

</div> Install dependencies

# If you have not done so already, install the following dependencies
!python -m pip install tensorflow==2.12.0 edgeimpulse

Transfer Learning

Dataset

Below is the structure of our dataset in our S3 bucket

car-vs-unknown
    |--training
        |--car
            |--abc.jpg
            |--def.jpg
        |--unknown
            |--ghi.jpg
            |--jkl.jpg
    |--testing
            |--car
                |--mno.jpg
                |--prs.jpg
            |--unknown
                |--tuv.jpg
                |--wxy.jpg

We have used the default bucket created when configuring SageMaker Studio domain:

import sagemaker, boto3, json
from sagemaker.session import Session

sagemaker_session = Session()
aws_role = sagemaker_session.get_caller_identity_arn()
aws_region = boto3.Session().region_name
print(aws_region)
sess = sagemaker.Session()

bucket = sess.default_bucket()
subfolder = 'car-vs-unknown/training/'

s3 = boto3.client('s3')
files = s3.list_objects(Bucket=bucket, Prefix=subfolder)['Contents']
print(f"Number of images: {len(files)}")
# or print the files
# for f in files:
#     print(f['Key'])

Train

You can continue with the default model, or can choose a different model from the list. Note that this tutorial has been tested with MobileNetv2 based models. A complete list of SageMaker pre-trained models can also be accessed at Sagemaker pre-trained Models.

from sagemaker.jumpstart.notebook_utils import list_jumpstart_models

# Retrieves all image classification models available by SageMaker Built-In Algorithms.
filter_value = "task in ['ic']"
ic_models = list_jumpstart_models(filter=filter_value)
# od_models = list_jumpstart_models()

print(f"Number of models available for inference: {len(ic_models)}")

# display the model-ids.
for model in ic_models:
    print(model)

from sagemaker import image_uris, model_uris

model_id, model_version = "tensorflow-ic-imagenet-mobilenet-v3-small-075-224", "*" # You can change the based model with one from the list generated above

# Retrieve the base model uri
base_model_uri = model_uris.retrieve( model_id=model_id, model_version=model_version, model_scope="inference")

print(base_model_uri)

Optional, ship this next cell if you don't want to retrain the model. And uncomment the last line of the cell after

from sagemaker import image_uris, model_uris, script_uris, hyperparameters
from sagemaker.estimator import Estimator

training_instance_type = "ml.m5.large"

# Retrieve the Docker image
train_image_uri = image_uris.retrieve(model_id=model_id,model_version=model_version,image_scope="training",instance_type=training_instance_type,region=None,framework=None)

# Retrieve the training script
train_source_uri = script_uris.retrieve(model_id=model_id, model_version=model_version, script_scope="training")

# Retrieve the pretrained model tarball for transfer learning
train_model_uri = model_uris.retrieve(model_id=model_id, model_version=model_version, model_scope="training")

# Retrieve the default hyper-parameters for fine-tuning the model
hyperparameters = hyperparameters.retrieve_default(model_id=model_id, model_version=model_version)

# [Optional] Override default hyperparameters with custom values
hyperparameters["epochs"] = "5"

# The sample training data is available in the following S3 bucket
training_data_bucket = f"{bucket}"
training_data_prefix = f"{subfolder}"
# training_data_bucket = f"jumpstart-cache-prod-{aws_region}"
# training_data_prefix = "training-datasets/tf_flowers/"

training_dataset_s3_path = f"s3://{training_data_bucket}/{training_data_prefix}"

output_bucket = sess.default_bucket()
output_prefix = "ic-car-vs-unknown"
s3_output_location = f"s3://{output_bucket}/{output_prefix}/output"

# Create SageMaker Estimator instance
tf_ic_estimator = Estimator(
    role=aws_role,
    image_uri=train_image_uri,
    source_dir=train_source_uri,
    model_uri=train_model_uri,
    entry_point="transfer_learning.py",
    instance_count=1,
    instance_type=training_instance_type,
    max_run=360000,
    hyperparameters=hyperparameters,
    output_path=s3_output_location
)

# Use S3 path of the training data to launch SageMaker TrainingJob
tf_ic_estimator.fit({"training": training_dataset_s3_path}, logs=True)

Retrieve and prepare the newly trained model

def download_from_s3(url):
    # Remove 's3://' prefix from URL
    url = url[5:]
    # Split URL by '/' to extract bucket name and key
    parts = url.split('/')
    bucket_name = parts[0]
    s3_key = '/'.join(parts[1:])
    # Download the file from S3
    s3.download_file(bucket_name, s3_key, 'model.tar.gz')

# Download
trained_model_s3_path = f"{s3_output_location}/{tf_ic_estimator._current_job_name}/output/model.tar.gz"
print(trained_model_s3_path)
download_from_s3(trained_model_s3_path)
# or if you just want to use the based model
#download_from_s3(base_model_uri)

import shutil, os

# Extract the .tar.gz file to a temporary directory
temp_directory = 'tmp'  # Replace with your actual temporary directory
tar_gz_file = 'model.tar.gz'  # Replace with the path to your .tar.gz file

# Create directory if does not exist
if not os.path.exists(temp_directory):
    os.makedirs(temp_directory)

shutil.unpack_archive(tar_gz_file, temp_directory)

import tensorflow as tf

print(tf.__version__)

model = tf.keras.models.load_model('tmp/1/')

converter = tf.lite.TFLiteConverter.from_keras_model(model)
tflite_model = converter.convert()

# Save the model.
with open('model.tflite', 'wb') as f:
  f.write(tflite_model)

Edge Impulse

You will need to obtain an API key from an Edge Impulse project. Log into edgeimpulse.com and create a new project. Open the project, navigate to Dashboard and click on the Keys tab to view your API keys. Double-click on the API key to highlight it, right-click, and select Copy.

Note that you do not actually need to use the project in the Edge Impulse Studio. We just need the API Key.

Paste that API key string in the ei.API_KEY value in the following cell:

import edgeimpulse as ei
ei.API_KEY = "ei_0a85c3a5ca92a35ee6f61aab18aadb9d9e167bd152f947f2056a4fb6a60977d8" # Change to your key

ei.model.list_profile_devices()

# Estimate the RAM, ROM, and inference time for our model on the target hardware family
try:
    profile = ei.model.profile(model='model.tflite',
                               device='raspberry-pi-4')
    print(profile.summary())
except Exception as e:
    print(f"Could not profile: {e}")

# List the available profile target devices
ei.model.list_deployment_targets()

# Get the labels from the label_info.json
import json

labels_info = open('tmp/labels_info.json')
labels_obj = json.load(labels_info)
labels = labels_obj['labels']
print(labels)

# Set model information, such as your list of labels
model_output_type = ei.model.output_type.Classification(labels=labels)
deploy_filename = "my_model_cpp.zip"

# Create C++ library with trained model
deploy_bytes = None
try:
    
    deploy_bytes = ei.model.deploy(model=model,
                                   model_output_type=model_output_type,
                                   engine='tflite',
                                   deploy_target='zip"')
except Exception as e:
    print(f"Could not deploy: {e}")
    
# Write the downloaded raw bytes to a file
if deploy_bytes:
    with open(deploy_filename, 'wb') as f:
        f.write(deploy_bytes.getvalue())

Voila! You now have a C++ library ready to be compiled and integrated in your embedded targets. Feel free to have a look at Edge Impulse deployment options on the documentation to understand how you can integrate that to your embedded systems.

You can also have a look at the deployment page of your project to test your model on a web browser or test

PreviousUsing the Edge Impulse Python SDK with Weights & Biases NextUsing the Edge Impulse Python SDK to upload and download data

Last updated 5 months ago

import sagemaker, boto3, json from sagemaker.session import Session sagemaker_session = Session() aws_role = sagemaker_session.get_caller_identity_arn() aws_region = boto3.Session().region_name print(aws_region) sess = sagemaker.Session()

bucket = sess.default_bucket() subfolder = 'car-vs-unknown/training/' s3 = boto3.client('s3') files = s3.list_objects(Bucket=bucket, Prefix=subfolder)['Contents'] print(f"Number of images: {len(files)}") # or print the files # for f in files: # print(f['Key'])

from sagemaker.jumpstart.notebook_utils import list_jumpstart_models # Retrieves all image classification models available by SageMaker Built-In Algorithms. filter_value = "task in ['ic']" ic_models = list_jumpstart_models(filter=filter_value) # od_models = list_jumpstart_models() print(f"Number of models available for inference: {len(ic_models)}") # display the model-ids. for model in ic_models: print(model)

from sagemaker import image_uris, model_uris model_id, model_version = "tensorflow-ic-imagenet-mobilenet-v3-small-075-224", "*" # You can change the based model with one from the list generated above # Retrieve the base model uri base_model_uri = model_uris.retrieve( model_id=model_id, model_version=model_version, model_scope="inference") print(base_model_uri)

from sagemaker import image_uris, model_uris, script_uris, hyperparameters from sagemaker.estimator import Estimator training_instance_type = "ml.m5.large" # Retrieve the Docker image train_image_uri = image_uris.retrieve(model_id=model_id,model_version=model_version,image_scope="training",instance_type=training_instance_type,region=None,framework=None) # Retrieve the training script train_source_uri = script_uris.retrieve(model_id=model_id, model_version=model_version, script_scope="training") # Retrieve the pretrained model tarball for transfer learning train_model_uri = model_uris.retrieve(model_id=model_id, model_version=model_version, model_scope="training") # Retrieve the default hyper-parameters for fine-tuning the model hyperparameters = hyperparameters.retrieve_default(model_id=model_id, model_version=model_version) # [Optional] Override default hyperparameters with custom values hyperparameters["epochs"] = "5" # The sample training data is available in the following S3 bucket training_data_bucket = f"{bucket}" training_data_prefix = f"{subfolder}" # training_data_bucket = f"jumpstart-cache-prod-{aws_region}" # training_data_prefix = "training-datasets/tf_flowers/" training_dataset_s3_path = f"s3://{training_data_bucket}/{training_data_prefix}" output_bucket = sess.default_bucket() output_prefix = "ic-car-vs-unknown" s3_output_location = f"s3://{output_bucket}/{output_prefix}/output" # Create SageMaker Estimator instance tf_ic_estimator = Estimator( role=aws_role, image_uri=train_image_uri, source_dir=train_source_uri, model_uri=train_model_uri, entry_point="transfer_learning.py", instance_count=1, instance_type=training_instance_type, max_run=360000, hyperparameters=hyperparameters, output_path=s3_output_location ) # Use S3 path of the training data to launch SageMaker TrainingJob tf_ic_estimator.fit({"training": training_dataset_s3_path}, logs=True)

def download_from_s3(url): # Remove 's3://' prefix from URL url = url[5:] # Split URL by '/' to extract bucket name and key parts = url.split('/') bucket_name = parts[0] s3_key = '/'.join(parts[1:]) # Download the file from S3 s3.download_file(bucket_name, s3_key, 'model.tar.gz') # Download trained_model_s3_path = f"{s3_output_location}/{tf_ic_estimator._current_job_name}/output/model.tar.gz" print(trained_model_s3_path) download_from_s3(trained_model_s3_path) # or if you just want to use the based model #download_from_s3(base_model_uri)

import shutil, os # Extract the .tar.gz file to a temporary directory temp_directory = 'tmp' # Replace with your actual temporary directory tar_gz_file = 'model.tar.gz' # Replace with the path to your .tar.gz file # Create directory if does not exist if not os.path.exists(temp_directory): os.makedirs(temp_directory) shutil.unpack_archive(tar_gz_file, temp_directory)

import tensorflow as tf print(tf.__version__) model = tf.keras.models.load_model('tmp/1/') converter = tf.lite.TFLiteConverter.from_keras_model(model) tflite_model = converter.convert() # Save the model. with open('model.tflite', 'wb') as f: f.write(tflite_model)

# Estimate the RAM, ROM, and inference time for our model on the target hardware family try: profile = ei.model.profile(model='model.tflite', device='raspberry-pi-4') print(profile.summary()) except Exception as e: print(f"Could not profile: {e}")

# Set model information, such as your list of labels model_output_type = ei.model.output_type.Classification(labels=labels) deploy_filename = "my_model_cpp.zip" # Create C++ library with trained model deploy_bytes = None try: deploy_bytes = ei.model.deploy(model=model, model_output_type=model_output_type, engine='tflite', deploy_target='zip"') except Exception as e: print(f"Could not deploy: {e}") # Write the downloaded raw bytes to a file if deploy_bytes: with open(deploy_filename, 'wb') as f: f.write(deploy_bytes.getvalue())